Index

A

absjoin() (in module isofit.utils.path) aerosol_model_file (RadiativeTransferEngineConfig attribute) aerosol_template_file (RadiativeTransferEngineConfig attribute) alt (RadiativeTransferEngineConfig attribute)

analytical_line() (in module isofit.utils.analytical_line) apply_oe() (in module isofit.utils.apply_oe) arcdist() (in module isofit.core.sunposition) atm_interpolation() (in module isofit.utils.atm_interpolation) az (Sunposition attribute)

B

background_reflectance_file (InputConfig attribute) BaseConfigSection (class in isofit.configs.base_config) beer_lambert_model() (in module isofit.inversion.inverse_simple) build_main_config() (in module isofit.utils.template_construction)

build_output() (IO method) build_presolve_config() (in module isofit.utils.template_construction) build_sixs_config() (in module isofit.radiative_transfer.sRTMnet) build_surface_config() (in module isofit.utils.template_construction)

C

cache_size (RadiativeTransferConfig attribute) calc_conditional_prior() (Inversion method) calc_lamb() (ForwardModel method) (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method) calc_Ls() (ForwardModel method) (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method) calc_meas() (ForwardModel method) calc_modtran_max_water() (in module isofit.utils.template_construction) calc_posterior() (Inversion method) calc_prior() (Inversion method) calc_rdn() (ForwardModel method) (RadiativeTransfer method) calc_rfl() (ForwardModel method) (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method)

calc_Seps() (Inversion method) calibration() (ForwardModel method) (Instrument method) check_config_validity() (BaseConfigSection method) check_inter_section_validity() (Config method) check_modtran_water_upperbound() (ModtranRT method) citation (Sunposition property) clear() (InputData method) combos() (in module isofit.core.common) component() (MultiComponentSurface method) conditional_gaussian() (in module isofit.core.common) Config (class in isofit.configs.configs) confPriority() (in module isofit.radiative_transfer.radiative_transfer) copy_file_subset() (in module isofit.utils.template_construction) coszen (RadiativeTransfer property) create_new_config() (in module isofit.configs.configs) create_profiles() (HRRR_to_MODTRAN_profiles method) cressie_map_confidence (InversionConfig attribute)

D

day (RadiativeTransferEngineConfig attribute) debug_mode (ImplementationConfig attribute) dec (Sunposition attribute) default() (SerialEncoder method) define_surface_types() (in module isofit.utils.template_construction) dlamb_dsurface() (LUTSurface method) (MultiComponentSurface method) (ThermalSurface method) dLs_dsurface() (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method)

dmeas_dinstrument() (Instrument method) dmeas_dinstrumentb() (Instrument method) download_HRRR() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) drdn_dRT() (RadiativeTransfer method) drdn_dRTb() (RadiativeTransfer method) drfl_dsurface() (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method) drfl_dsurfaceb() (Surface method) dt (Sunposition attribute)

E

earth_sun_distance_file (RadiativeTransferEngineConfig attribute) elev (RadiativeTransferEngineConfig attribute) (Sunposition attribute) emissive_radiance() (in module isofit.core.common) emissivity_for_surface_T_init (SurfaceConfig attribute) empirical_line() (in module isofit.utils.empirical_line) emulator_aux_file (RadiativeTransferEngineConfig attribute) emulator_file (RadiativeTransferEngineConfig attribute) engine_base_dir (RadiativeTransferEngineConfig attribute)

engine_lut_file (RadiativeTransferEngineConfig attribute) engine_name (RadiativeTransferEngineConfig attribute) envi_header() (in module isofit.core.common) environment (RadiativeTransferEngineConfig attribute) expand_all_paths() (in module isofit.core.common) expand_path() (in module isofit.core.common) ext550_to_vis() (in module isofit.radiative_transfer.radiative_transfer) extract_chunk() (in module isofit.utils.extractions) extractions() (in module isofit.utils.extractions)

F

fast_resample (InstrumentConfig attribute) FileExistsError find_header() (in module isofit.core.common) fit_params() (LUTSurface method) (MultiComponentSurface method) (Surface method) (ThermalSurface method)

flush_buffers() (IO method) (SpectrumFile method) forward_model (Config attribute) forward_uncertainty() (Inversion method) ForwardModel (class in isofit.core.forward) ForwardModelConfig (class in isofit.configs.sections.forward_model_config) ftol (LeastSquaresConfig attribute) full_statevector() (Inversion method)

G

generate_noise() (in module isofit.utils.generate_noise) Geometry (class in isofit.core.geometry) get_absorption() (in module isofit.core.common) get_all_bounds() (StateVectorConfig method) get_all_element_names() (BaseConfigSection method) get_all_elements() (BaseConfigSection method) get_all_inits() (StateVectorConfig method) get_all_output_file_names() (OutputConfig method) get_all_prior_means() (StateVectorConfig method) get_all_prior_sigmas() (StateVectorConfig method) get_all_scales() (StateVectorConfig method) get_angular_grid() (in module isofit.utils.template_construction) (LUTConfig method) get_components_at_index() (IO method) get_config_as_dict() (Config method) get_config_differences() (in module isofit.configs.configs) get_config_errors() (Config method) get_config_options_as_dict() (BaseConfigSection method) get_element_names() (BaseConfigSection method)

get_elements() (BaseConfigSection method) get_esd_factor() (Geometry method) get_frame() (SpectrumFile method) get_grid() (in module isofit.utils.template_construction) (LUTConfig method) get_HRRR_data() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) get_L_atm() (RadiativeTransfer method) (SimulatedModtranRT method) get_L_down_transmitted() (RadiativeTransfer method) (SimulatedModtranRT method) get_lut_subset() (in module isofit.utils.template_construction) get_metadata_from_loc() (in module isofit.utils.template_construction) get_metadata_from_obs() (in module isofit.utils.template_construction) get_output_files() (OutputConfig method) get_refractive_index() (in module isofit.core.common) get_shared_rtm_quantities() (RadiativeTransfer method) get_single_element_by_name() (BaseConfigSection method) glt_file (InputConfig attribute) gtol (LeastSquaresConfig attribute)

H

h (Sunposition attribute)

heuristic_atmosphere() (in module isofit.inversion.inverse_simple) HRRR_to_MODTRAN_profiles (class in isofit.utils.add_HRRR_profiles_to_modtran_config)

I

implementation (Config attribute) ImplementationConfig (class in isofit.configs.sections.implementation_config) input (Config attribute) InputConfig (class in isofit.configs.sections.input_config) InputData (class in isofit.core.fileio) Instrument (class in isofit.core.instrument) instrument (ForwardModelConfig attribute) instrument_model() (in module isofit.utils.instrument_model) InstrumentConfig (class in isofit.configs.sections.instrument_config) InstrumentUnknowns (class in isofit.configs.sections.instrument_config) integration_grid (InversionConfig attribute) integrations (InstrumentConfig attribute) interpolate_atmosphere() (in module isofit.utils.interpolate_atmosphere) interpolator_base_path (RadiativeTransferEngineConfig attribute) interpolator_style (RadiativeTransferConfig attribute) Inversion (class in isofit.inversion.inverse) inversion (ImplementationConfig attribute) inversion_grid_as_preseed (InversionConfig attribute) InversionConfig (class in isofit.configs.sections.inversion_config) invert() (Inversion method) (MCMCInversion method) invert_algebraic() (in module isofit.inversion.inverse_simple) invert_analytical() (in module isofit.inversion.inverse_simple) invert_liquid_water() (in module isofit.inversion.inverse_simple) invert_simple() (in module isofit.inversion.inverse_simple) IO (class in isofit.core.fileio) io_buffer_size (ImplementationConfig attribute) ip_head (ImplementationConfig attribute) irradiance_file (RadiativeTransferEngineConfig attribute) isofit module Isofit (class in isofit.core.isofit) isofit.configs module isofit.configs.base_config module isofit.configs.configs module isofit.configs.sections module isofit.configs.sections.forward_model_config module isofit.configs.sections.implementation_config module isofit.configs.sections.input_config module isofit.configs.sections.instrument_config module isofit.configs.sections.inversion_config module isofit.configs.sections.output_config module isofit.configs.sections.radiative_transfer_config module isofit.configs.sections.statevector_config module isofit.configs.sections.surface_config module isofit.core module isofit.core.common module isofit.core.fileio module isofit.core.forward module isofit.core.geometry module isofit.core.instrument module isofit.core.isofit module isofit.core.sunposition module

isofit.inversion module isofit.inversion.inverse module isofit.inversion.inverse_mcmc module isofit.inversion.inverse_simple module isofit.radiative_transfer module isofit.radiative_transfer.modtran module isofit.radiative_transfer.radiative_transfer module isofit.radiative_transfer.six_s module isofit.radiative_transfer.sRTMnet module isofit.surface module isofit.surface.surface module isofit.surface.surface_lut module isofit.surface.surface_multicomp module isofit.surface.surface_thermal module isofit.test module isofit.test.test_common module isofit.test.test_fileio module isofit.test.test_forward module isofit.test.test_geometry module isofit.test.test_instrument module isofit.test.test_inverse module isofit.test.test_sunposition module isofit.utils module isofit.utils.add_HRRR_profiles_to_modtran_config module isofit.utils.analytical_line module isofit.utils.apply_oe module isofit.utils.atm_interpolation module isofit.utils.empirical_line module isofit.utils.extractions module isofit.utils.generate_noise module isofit.utils.instrument_model module isofit.utils.interpolate_atmosphere module isofit.utils.path module isofit.utils.remap module isofit.utils.segment module isofit.utils.surface_model module isofit.utils.template_construction module iterations (McmcConfig attribute)

J

jacobian() (Inversion method)

json_load_ascii() (in module isofit.core.common) julian_day() (in module isofit.core.sunposition)

K

K() (ForwardModel method)

Kb() (ForwardModel method)

L

lat (Sunposition attribute) leaky_re_lu() (tfLikeModel method) least_squares_params (InversionConfig attribute) LeastSquaresConfig (class in isofit.configs.sections.inversion_config) load_chn() (ModtranRT method) load_climatology() (in module isofit.utils.template_construction) load_esd() (SixSRT method) load_spectrum() (in module isofit.core.common) load_tp6() (ModtranRT static method)

load_wavelen() (in module isofit.core.common) loc_file (InputConfig attribute) log_density() (MCMCInversion method) lon (Sunposition attribute) loss_function() (Inversion method) lut_names (RadiativeTransferEngineConfig attribute) lut_path (RadiativeTransferEngineConfig attribute) lut_quantities (SimulatedModtranRT attribute) LUTConfig (class in isofit.utils.template_construction) LUTSurface (class in isofit.surface.surface_lut)

M

make_directories() (Pathnames method) makeSim() (ModtranRT method) (SimulatedModtranRT method) (SixSRT method) max_hash_table_size (ImplementationConfig attribute) max_nfev (LeastSquaresConfig attribute) mcmc (InversionConfig attribute) McmcConfig (class in isofit.configs.sections.inversion_config) MCMCInversion (class in isofit.inversion.inverse_mcmc) measured_radiance_file (InputConfig attribute) method (LeastSquaresConfig attribute) mode (ImplementationConfig attribute) model_discrepancy_file (ForwardModelConfig attribute) modtran_driver() (ModtranRT method) ModtranRT (class in isofit.radiative_transfer.modtran) module isofit isofit.configs isofit.configs.base_config isofit.configs.configs isofit.configs.sections isofit.configs.sections.forward_model_config isofit.configs.sections.implementation_config isofit.configs.sections.input_config isofit.configs.sections.instrument_config isofit.configs.sections.inversion_config isofit.configs.sections.output_config isofit.configs.sections.radiative_transfer_config isofit.configs.sections.statevector_config isofit.configs.sections.surface_config isofit.core isofit.core.common isofit.core.fileio isofit.core.forward isofit.core.geometry isofit.core.instrument isofit.core.isofit isofit.core.sunposition isofit.inversion isofit.inversion.inverse isofit.inversion.inverse_mcmc isofit.inversion.inverse_simple isofit.radiative_transfer isofit.radiative_transfer.modtran isofit.radiative_transfer.radiative_transfer isofit.radiative_transfer.six_s isofit.radiative_transfer.sRTMnet isofit.surface isofit.surface.surface isofit.surface.surface_lut isofit.surface.surface_multicomp isofit.surface.surface_thermal isofit.test isofit.test.test_common isofit.test.test_fileio isofit.test.test_forward isofit.test.test_geometry isofit.test.test_instrument isofit.test.test_inverse isofit.test.test_sunposition isofit.utils isofit.utils.add_HRRR_profiles_to_modtran_config isofit.utils.analytical_line isofit.utils.apply_oe isofit.utils.atm_interpolation isofit.utils.empirical_line isofit.utils.extractions isofit.utils.generate_noise isofit.utils.instrument_model isofit.utils.interpolate_atmosphere isofit.utils.path isofit.utils.remap isofit.utils.segment isofit.utils.surface_model isofit.utils.template_construction

month (RadiativeTransferEngineConfig attribute) MultiComponentSurface (class in isofit.surface.surface_multicomp) multipart_transmittance (RadiativeTransferEngineConfig attribute)

N

n_cores (ImplementationConfig attribute) name (RadiativeTransferEngineConfig attribute)

nedt_noise_file (InstrumentConfig attribute) next_diag_val() (in module isofit.utils.surface_model)

O

obs_file (InputConfig attribute) (RadiativeTransferEngineConfig attribute) observed_sunpos() (in module isofit.core.sunposition) open_map_with_retries() (SpectrumFile method)

out_of_bounds() (ForwardModel method) output (Config attribute) OutputConfig (class in isofit.configs.sections.output_config) overwrite_interpolator (RadiativeTransferConfig attribute)

P

p (Sunposition attribute) pack_arrays() (RadiativeTransfer method) parametric_noise_file (InstrumentConfig attribute) parse_file() (SixSRT static method) parseLine() (ModtranRT static method) parseTokens() (ModtranRT static method) Pathnames (class in isofit.utils.template_construction)

postSim() (SixSRT method) predict() (tfLikeModel method) preSim() (ModtranRT method) (SimulatedModtranRT method) (SixSRT method) priors_in_initial_guess (InversionConfig attribute) pushbroom_noise_file (InstrumentConfig attribute)

R

ra (Sunposition attribute) rad (Sunposition attribute) radiative_transfer (ForwardModelConfig attribute) RadiativeTransfer (class in isofit.radiative_transfer.radiative_transfer) RadiativeTransferConfig (class in isofit.configs.sections.radiative_transfer_config) RadiativeTransferEngineConfig (class in isofit.configs.sections.radiative_transfer_config) RadiativeTransferUnknownsConfig (class in isofit.configs.sections.radiative_transfer_config) radiometry_correction_file (InputConfig attribute) ray_ignore_reinit_error (ImplementationConfig attribute) ray_include_dashboard (ImplementationConfig attribute) ray_start() (in module isofit.core.common) ray_temp_dir (ImplementationConfig attribute) read_spectrum() (SpectrumFile method) readSim() (ModtranRT method) (SimulatedModtranRT method) (SixSRT method)

reassemble_cube() (in module isofit.utils.template_construction) rebuild_cmd() (SixSRT method) recursive_dict_search() (in module isofit.radiative_transfer.sRTMnet) recursive_reencode() (in module isofit.core.common) recursive_replace() (in module isofit.core.common) redis_password (ImplementationConfig attribute) reference_reflectance_file (InputConfig attribute) reflectance_file (InputConfig attribute) remap() (in module isofit.utils.remap) reporthook() (in module isofit.utils.add_HRRR_profiles_to_modtran_config) required_results_exist() (ModtranRT method) resample_reflectance() (Surface method) resample_spectrum() (in module isofit.core.common) rte_auto_rebuild (ImplementationConfig attribute) rte_configure_and_exit (ImplementationConfig attribute) run() (Isofit method)

S

Sa() (ForwardModel method) (Instrument method) (LUTSurface method) (MultiComponentSurface method) (RadiativeTransfer method) (Surface method) (ThermalSurface method) sample() (Instrument method) segment() (in module isofit.utils.segment) segment_chunk() (in module isofit.utils.segment) select_on_init (SurfaceConfig attribute) Seps() (ForwardModel method) SerialEncoder (class in isofit.utils.template_construction) set_config_options() (BaseConfigSection method) shutdown_ray() (in module isofit) sim_path (RadiativeTransferEngineConfig attribute) simulate_measurement() (Instrument method) SimulatedModtranRT (class in isofit.radiative_transfer.sRTMnet) SixSRT (class in isofit.radiative_transfer.six_s) SNR (InstrumentConfig attribute) solaz (RadiativeTransferEngineConfig attribute) solzen (RadiativeTransferEngineConfig attribute)

spectral_response_function() (in module isofit.core.common) SpectrumFile (class in isofit.core.fileio) stable_mvnpdf() (MCMCInversion method) stage_files() (Pathnames method) statevector_names (RadiativeTransferEngineConfig attribute) StateVectorConfig (class in isofit.configs.sections.statevector_config) StateVectorElementConfig (class in isofit.configs.sections.statevector_config) summarize() (ForwardModel method) (Instrument method) (LUTSurface method) (MultiComponentSurface method) (RadiativeTransfer method) (Surface method) (ThermalSurface method) sunpos() (in module isofit.core.sunposition) Sunposition (class in isofit.core.sunposition) Surface (class in isofit.surface.surface) surface (ForwardModelConfig attribute) surface_model() (in module isofit.utils.surface_model) SurfaceConfig (class in isofit.configs.sections.surface_config) svd_inv() (in module isofit.core.common) svd_inv_sqrt() (in module isofit.core.common) Sy() (Instrument method)

T

t (Sunposition attribute) task_inflation_factor (ImplementationConfig attribute) temp (Sunposition attribute) template_file (RadiativeTransferEngineConfig attribute) test__sp() (in module isofit.test.test_sunposition) test_combos() (in module isofit.test.test_common) test_eps() (in module isofit.test.test_common) test_error_code() (in module isofit.test.test_forward) (in module isofit.test.test_inverse) test_expand_path() (in module isofit.test.test_common) test_Geometry() (in module isofit.test.test_geometry) test_get_absorption() (in module isofit.test.test_common) test_interpolators() (in module isofit.test.test_common) test_load_spectrum() (in module isofit.test.test_common)

test_load_wavelen() (in module isofit.test.test_common) test_max_frames_size() (in module isofit.test.test_fileio) test_recursive_replace() (in module isofit.test.test_common) test_spectral_response_function() (in module isofit.test.test_common) test_svd_inv() (in module isofit.test.test_common) test_svd_inv_sqrt() (in module isofit.test.test_common) test_typemap() (in module isofit.test.test_fileio) test_wl_tol() (in module isofit.test.test_instrument) tfLikeModel (class in isofit.radiative_transfer.sRTMnet) ThermalSurface (class in isofit.surface.surface_thermal) topocentric_sunpos() (in module isofit.core.sunposition) topography_model (RadiativeTransferEngineConfig attribute) tr_solver (LeastSquaresConfig attribute) Track (class in isofit.core.common) treat_as_emissive (RadiativeTransferEngineConfig attribute)

U

unpack() (ForwardModel method)

upsample() (ForwardModel method)

V

VectorInterpolator (class in isofit.core.common)

viewaz (RadiativeTransferEngineConfig attribute) viewzen (RadiativeTransferEngineConfig attribute)

W

wavelength_file (RadiativeTransferEngineConfig attribute) wavelength_range (RadiativeTransferEngineConfig attribute) windows (InversionConfig attribute) wl2flt() (ModtranRT method) Worker (class in isofit.core.isofit) (class in isofit.utils.analytical_line)

write_bil_chunk() (in module isofit.core.fileio) write_datasets() (IO method) write_modtran_template() (in module isofit.utils.template_construction) write_spectrum() (IO method) (SpectrumFile method)

X

xa() (ForwardModel method) (Instrument method) (LUTSurface method) (MultiComponentSurface method) (RadiativeTransfer method) (Surface method) (ThermalSurface method)

xtol (LeastSquaresConfig attribute)

Z

zen (Sunposition attribute)